Jeroen de Ridder

Full Professor

Strategic program(s):

Contact

jridder4@umcutrecht.nl

Pure profile

Research groups

Bioinformatics in molecular medicine

Research aim

We are a bioinformatics lab that creates and applies innovative data science methods to advance our understanding of disease biology and molecular medicine with a focus on cancer research.

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Recent publications

All publications

NGS-based Aspergillus detection in plasma and lung lavage of children with invasive pulmonary aspergillosis Emmy Wesdorp, Laura Rotte, Li-Ting Chen, Myrthe Jager, Nicolle Besselink, Carlo Vermeulen, Ferry Hagen, Tjomme van der Bruggen, Caroline Lindemans, Tom Wolfs, Louis Bont, Jeroen de Ridder
npj Genomic Medicine, 2025, vol. 10

Nanopore-based consensus sequencing enables accurate multimodal tumor cell-free DNA profiling Li-Ting Chen, Myrthe Jager, Dàmi Rebergen, Geertruid J Brink, Tom van den Ende, Willem Vanderlinden, Pauline Kolbeck, Marc Pagès-Gallego, Ymke van der Pol, Nicolle Besselink, Norbert Moldovan, Nizar Hami, Wigard P Kloosterman, Hanneke van Laarhoven, Florent Mouliere, Ronald Zweemer, Jan Lipfert, Sarah Derks, Alessio Marcozzi, Jeroen de Ridder
Genome Research, 2025, vol. 35, p.886-899

Evidence of survival bias in the association between APOE-Є4 and age at ischemic stroke onset Joanna von Berg, Patrick F. McArdle, Paavo Häppölä, Jeffrey Haessler, Charles Kooperberg, Robin Lemmens, Alessandro Pezzini, Vincent Thijs, Sara L. Pulit, Steven J. Kittner, Braxton D. Mitchell, Jeroen de Ridder, Sander W. van der Laan,
Frontiers in Genetics, 2024, vol. 15

Glioblastoma, IDH-wildtype with primarily leptomeningeal localization diagnosed by nanopore sequencing of cell-free DNA from cerebrospinal fluid Nik Sol, Evert Jan Kooi, Marc Pagès-Gallego, Dieta Brandsma, Marianna Bugiani, Jeroen de Ridder, Pieter Wesseling, Carlo Vermeulen
Acta Neuropathologica, 2024, vol. 148, p.1-4

Co-expression in tissue-specific gene networks links genes in cancer-susceptibility loci to known somatic driver genes Carlos G. Urzúa-Traslaviña, Tijs van Lieshout, Floranne Boulogne, Kevin Domanegg, Mahmoud Zidan, Olivier B. Bakker, Annique Claringbould, Jeroen de Ridder, Wilbert Zwart, Harm Jan Westra, Patrick Deelen, Lude Franke
BMC Medical Genomics, 2024, vol. 17

Evidence of survival bias in the association between APOE-ϵ4 and age of ischemic stroke onset. Joanna von Berg, Patrick F McArdle, Paavo Häppölä, Jeffrey Haessler, Charles Kooperberg, Robin Lemmens, Alessandro Pezzini, Vincent Thijs, Sara L Pulit, Steven J Kittner, Braxton D Mitchell, Jeroen de Ridder, Sander W van der Laan,
2023

External positions

Chief Science Officer - Management of R&D and science activities - Cyclomics BV