Vermeulen

Assistant Professor

Strategic program(s):

Contact

cvermeu2@umcutrecht.nl

Pure profile

Recent publications

All publications

Direct detection of 8-oxo-dG using nanopore sequencing Marc Pagès-Gallego, Daan M.K. van Soest, Nicolle J.M. Besselink, Roy Straver, Janneke P. Keijer, Carlo Vermeulen, Alessio Marcozzi, Markus J. van Roosmalen, Ruben van Boxtel, Boudewijn M.T. Burgering, Tobias B. Dansen, Jeroen de Ridder
Nature Communications, 2025, vol. 16

NGS-based Aspergillus detection in plasma and lung lavage of children with invasive pulmonary aspergillosis Emmy Wesdorp, Laura Rotte, Li-Ting Chen, Myrthe Jager, Nicolle Besselink, Carlo Vermeulen, Ferry Hagen, Tjomme van der Bruggen, Caroline Lindemans, Tom Wolfs, Louis Bont, Jeroen de Ridder
npj Genomic Medicine, 2025, vol. 10

Long-read sequencing identifies copy-specific markers of SMN gene conversion in spinal muscular atrophy M M Zwartkruis, M G Elferink, D Gommers, I Signoria, L Blasco-Pérez, M Costa-Roger, J van der Sel, I J Renkens, J W Green, J V Kortooms, C Vermeulen, R Straver, H W M van Deutekom, J H Veldink, F Asselman, E F Tizzano, R I Wadman, W L van der Pol, G W van Haaften, E J N Groen
Genome Medicine, 2025, vol. 17

Glioblastoma, IDH-wildtype with primarily leptomeningeal localization diagnosed by nanopore sequencing of cell-free DNA from cerebrospinal fluid Nik Sol, Evert Jan Kooi, Marc Pagès-Gallego, Dieta Brandsma, Marianna Bugiani, Jeroen de Ridder, Pieter Wesseling, Carlo Vermeulen
Acta Neuropathologica, 2024, vol. 148, p.1-4

Multi-contact 4C Carlo Vermeulen, Amin Allahyar, Britta A M Bouwman, Peter H L Krijger, Marjon J A M Verstegen, Geert Geeven, Christian Valdes-Quezada, Ivo Renkens, Roy Straver, Wigard P Kloosterman, Jeroen de Ridder, Wouter de Laat
Nature Protocols, 2020, vol. 15, p.364-397

Enhancer hubs and loop collisions identified from single-allele topologies Amin Allahyar, Carlo Vermeulen, Britta A M Bouwman, Peter H L Krijger, Marjon J A M Verstegen, Geert Geeven, Melissa van Kranenburg, Mark Pieterse, Roy Straver, Judith H I Haarhuis, Kees Jalink, Hans Teunissen, Ivo J Renkens, Wigard P Kloosterman, Benjamin D Rowland, Elzo de Wit, Jeroen de Ridder, Wouter de Laat
Nature Genetics, 2018, vol. 50, p.1151-1160