Profile photo Michal Mokry

Michal Mokry

Associate Professor

Strategic program(s):

Biography

In my research, I unravel the biological mechanisms behind atherosclerosis. I employ a combination of bulk and single-cell transcriptomics, epigenetics, and bioinformatics, and integrate these approaches with clinical datasets and in vitro experiments.

My work leverages the largest biobank of well-characterized atherosclerotic plaques from over 4,000 patients, known as the Athero-Express study. We generate a variety of complex “-omics” datasets, which include genotyping, transcriptomics (bulk, single-cell, and spatially resolved), DNA methylation (both bulk and single-cell), and proteomics. These datasets are integrated with histological and clinical data to decode the mechanisms of plaque pathogenesis. This integration enables us to pinpoint specific processes that lead to severe manifestations of atherosclerotic disease, such as stroke and myocardial infarction. Alongside computational tools, we utilize primary in vitro model systems derived from vascular and plaque cells, as well as molecular biology techniques, for validation and mechanistic studies."

Research groups

Cardiovascular disease in women

Research aim

Our group's aim is to translate knowledge from experimental cardiovascular research to improve womens's cardiovascular health.

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Recent publications

A Collection of Patient-Derived Intestinal Organoid Lines Reveals Epithelial Phenotypes Associated with Genetic Drivers of Pediatric Inflammatory Bowel Disease Zahra Shojaei Jeshvaghani, Carmen Argmann, Maaike H de Vries, Johan H van Es, Lauren V Collen, Daniel Kotlarz, Mia Sveen, Phillip H Comella, Scott B Snapper, Christoph Klein, Eric E Schadt, Hans Clevers, Michal Mokry, Ewart Kuijk, Edward Nieuwenhuis
Inflammatory bowel diseases, 2025, vol. 32, p.9-24
Human colon stem cells are the predominant epithelial responders to bacterial antigens Maaike H De Vries, Claartje A Meddens, Hemme J Hijma, Anne-Claire Berrens, Suze A Jansen, Berend A P Kooiman, Scott Snapper, Hans Clevers, Michal Mokry, Ewart W Kuijk, Edward E S Nieuwenhuis
Frontiers in Immunology, 2025, vol. 16
Computational Modeling Predicts Benefits of Proefferocytic Therapy in Human Atherosclerosis Kai-Uwe Jarr, Kaylin C A Palm, Gerard Pasterkamp, Michal Mokry, Nicholas J Leeper
Circulation, 2025, vol. 152, p.208-211
A collection of patient-derived intestinal organoid lines reveals epithelial pheno-types associated with genetic drivers of pediatric inflammatory bowel disease Zahra Shojaei Jeshvaghani, Carmen Argmann, Michal Mokry, Johan H van Es, Maaike H de Vries, Lauren V Collen, Daniel Kotlarz, Mia Sveen, Phillip Comella, Scott B Snapper, Christoph Klein, Eric Schadt, Hans Clevers, Ewart Kuijk, Edward Nieuwenhuis
2025
Genetically determined ancestry associates with morphological and molecular carotid plaque features Nima Fahim, Tim R Sakkers, Joost Hoekstra, Dominique P V de Kleijn, Michal Mokry, Jose Verdezoto Mosquera, Gerard Pasterkamp, Hester M den Ruijter, Clint L Miller, Jessica van Setten, Sander W van der Laan
2025
Proteomic profiling reveals a higher presence of glycolytic enzymes in human atherosclerotic lesions with unfavourable histological characteristics Kaylin C A Palm, Xiaoke Yin, Ferheen Baig, Konstantinos Theofilatos, Sander W van der Laan, Gert J de Borst, Dominique P V de Kleijn, Johann Wojta, Stefan Stojkovic, Manuel Mayr, Hester M den Ruijter, Gerard Pasterkamp, Ernest Diez Benavente, Michal Mokry
Cardiovascular research, 2025, vol. 121, p.1187-1203