Profile photo Jeroen de Ridder

Jeroen de Ridder

Full Professor

Strategic program(s):

Strategic program(s):

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Research groups

Bioinformatics in molecular medicine

Research aim

We are a bioinformatics lab that creates and applies innovative data science methods to advance our understanding of disease biology and molecular medicine with a focus on cancer research.

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Recent publications

WEE1 inhibitor adavosertib in combination with carboplatin in advanced TP53 mutated ovarian cancer Alaa Embaby, Joachim Kutzera, Jill J Geenen, Dick Pluim, Ingrid Hofland, Joyce Sanders, Marta Lopez-Yurda, Jos H Beijnen, Alwin D R Huitema, Petronella O Witteveen, Neeltje Steeghs, Gijs van Haaften, Marcel A T M van Vugt, Jeroen de Ridder, Frans L Opdam
Gynecologic Oncology, 2023, vol. 174, p.239-246
Author Correction Alessio Marcozzi, Myrthe Jager, Martin Elferink, Roy Straver, Joost H van Ginkel, Boris Peltenburg, Li-Ting Chen, Ivo Renkens, Joyce van Kuik, Chris Terhaard, Remco de Bree, Lot A Devriese, Stefan M Willems, Wigard P Kloosterman, Jeroen de Ridder
npj Genomic Medicine, 2023, vol. 8
Echtvar Brent S. Pedersen, Jeroen de Ridder
Nucleic acids research, 2023, vol. 51, p.1-8
Comprehensive benchmark and architectural analysis of deep learning models for nanopore sequencing basecalling Marc Pagès-Gallego, Jeroen de Ridder
Genome Biology, 2023, vol. 24, p.1-18
Predicting response to enzalutamide and abiraterone in metastatic prostate cancer using whole-omics machine learning Anouk C. de Jong, Alexandra Danyi, Job van Riet, Ronald de Wit, Martin Sjöström, Felix Feng, Jeroen de Ridder, Martijn P. Lolkema
Nature Communications, 2023, vol. 14, p.1-19
The genome-wide mutational consequences of DNA hypomethylation Nicolle Besselink, Janneke Keijer, Carlo Vermeulen, Sander Boymans, Jeroen de Ridder, Arne van Hoeck, Edwin Cuppen, Ewart Kuijk
Scientific Reports, 2023, vol. 13

External positions

Junior Principal Investigator, Oncode Institute

CTO, Cyclomics