Profile photo Adrien Melquiond

Adrien Melquiond

Assistant Professor

Strategic program(s):

Strategic program(s):

Contact

Recent publications

The HADDOCK2.4 web server for integrative modeling of biomolecular complexes Rodrigo V Honorato, Mikael E Trellet, Brian Jiménez-García, Jörg J Schaarschmidt, Marco Giulini, Victor Reys, Panagiotis I Koukos, João P G L M Rodrigues, Ezgi Karaca, Gydo C P van Zundert, Jorge Roel-Touris, Charlotte W van Noort, Zuzana Jandová, Adrien S J Melquiond, Alexandre M J J Bonvin
Nature protocols, 2024, vol. 19, p.3219-3241
An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45 Panagiotis I Koukos, Jorge Roel-Touris, Francesco Ambrosetti, Cunliang Geng, Jörg Schaarschmidt, Mikael E Trellet, Adrien S J Melquiond, Li C Xue, Rodrigo V Honorato, Irina Moreira, Zeynep Kurkcuoglu, Anna Vangone, Alexandre M J J Bonvin
Proteins: Structure function and bioinformatics, 2020, vol. 88, p.1029-1036
Blind prediction of homo- and hetero-protein complexes Marc F Lensink, Guillaume Brysbaert, Nurul Nadzirin, Sameer Velankar, Raphaël A G Chaleil, Tereza Gerguri, Paul A Bates, Elodie Laine, Alessandra Carbone, Sergei Grudinin, Ren Kong, Ran-Ran Liu, Xi-Ming Xu, Hang Shi, Shan Chang, Miriam Eisenstein, Agnieszka Karczynska, Cezary Czaplewski, Emilia Lubecka, Agnieszka Lipska, Paweł Krupa, Magdalena Mozolewska, Łukasz Golon, Sergey Samsonov, Adam Liwo, Silvia Crivelli, Guillaume Pagès, Mikhail Karasikov, Maria Kadukova, Yumeng Yan, Sheng-You Huang, Mireia Rosell, Luis A Rodríguez-Lumbreras, Miguel Romero-Durana, Lucía Díaz-Bueno, Juan Fernandez-Recio, Charles Christoffer, Genki Terashi, Woong-Hee Shin, Tunde Aderinwale, Sai Raghavendra Maddhuri Venkata Subraman, Daisuke Kihara, Dima Kozakov, Sandor Vajda, Kathryn Porter, Dzmitry Padhorny, Israel Desta, Dmitri Beglov, Mikhail Ignatov, Sergey Kotelnikov, Iain H Moal, David W Ritchie, Isaure Chauvot de Beauchêne, Bernard Maigret, Marie-Dominique Devignes, Maria E Ruiz Echartea, Didier Barradas-Bautista, Zhen Cao, Luigi Cavallo, Romina Oliva, Yue Cao, Yang Shen, Minkyung Baek, Taeyong Park, Hyeonuk Woo, Chaok Seok, Merav Braitbard, Lirane Bitton, Dina Scheidman-Duhovny, Justas Dapkūnas, Kliment Olechnovič, Česlovas Venclovas, Petras J Kundrotas, Saveliy Belkin, Devlina Chakravarty, Varsha D Badal, Ilya A Vakser, Thom Vreven, Sweta Vangaveti, Tyler Borrman, Zhiping Weng, Johnathan D Guest, Ragul Gowthaman, Brian G Pierce, Xianjin Xu, Rui Duan, Liming Qiu, Jie Hou, Benjamin Ryan Merideth, Zhiwei Ma, Jianlin Cheng, Xiaoqin Zou, Panagiotis I Koukos, Jorge Roel-Touris, Francesco Ambrosetti, Cunliang Geng, Jörg Schaarschmidt, Mikael E Trellet, Adrien S J Melquiond, Li Xue, Brian Jiménez-García, Charlotte W van Noort, Rodrigo V Honorato, Alexandre M J J Bonvin, Shoshana J Wodak
Proteins: Structure function and bioinformatics, 2019, vol. 87, p.1200-1221
Performance of HADDOCK and a simple contact-based protein-ligand binding affinity predictor in the D3R Grand Challenge 2 Zeynep Kurkcuoglu, Panagiotis I Koukos, Nevia Citro, Mikael E Trellet, J P G L M Rodrigues, Irina S Moreira, Jorge Roel-Touris, Adrien S J Melquiond, Cunliang Geng, Jörg Schaarschmidt, Li C Xue, Anna Vangone, A M J J Bonvin
Journal of computer-aided molecular design, 2018, vol. 32, p.175-185
Erratum to A Vangone, J P G L M Rodrigues, L C Xue, G C P van Zundert, C Geng, Z Kurkcuoglu, M Nellen, S Narasimhan, E Karaca, M van Dijk, A S J Melquiond, K M Visscher, M Trellet, P L Kastritis, A M J J Bonvin
Proteins: Structure function and bioinformatics, 2017, vol. 85, p.1589-1590
Sense and simplicity in HADDOCK scoring A Vangone, J P G L M Rodrigues, L C Xue, G C P van Zundert, C Geng, Z Kurkcuoglu, M Nellen, S Narasimhan, E Karaca, M van Dijk, A S J Melquiond, K M Visscher, M Trellet, P L Kastritis, A M J J Bonvin
Proteins: Structure function and bioinformatics, 2016, vol. 85, p.417-423