Profile photo Sander van der Laan

Sander van der Laan

Assistant Professor

Strategic program(s):

Biography

I am an assistant professor leading a team of enthousiastic computational scientists and (medical) biologists at the Central Diagnostics Laboratory and a member of the Circulatory Health Program at the University Medical Center Utrecht.

 

My team

In our team's research we focus on the genetic causes of atherosclerosis and its effects on plaque morphology that underly ischemic stroke and coronary artery disease, and subclinical atherosclerosis of the carotid and coronaries

With our collaborative work we aim to move from genome-wide association studies loci to novel therapeutic targets and (surrogate) biomarkers for cardiovascular diseases through extensive in silico, and in vitro modelling.

As a means to this end, my team is currently working on integrating Bayesian fine-mapping methodology, co-localization, causal inference through Mendelian Randomization, expression and methylation quantitative trait loci analyses, GWAS, single-cell RNA sequencing, and plaque characterization based on high-throughput imaging of histological slides and machine learning algorithms. This has resulted in the identification of 28 loci with a substrate in plaques that harbor genes potentially causal to atherosclerosis and amenable to therapy. 

Our vision is that this holistic approach will identify the truly viable targets to feed the drug developmental pipeline to combat the cardiovascular disease epidemic. This approach is entirely human-centered and does not involved new in vivo experiments.

My team supports and promotes principles of Open Science by letting values of quality and integrity, science for the benefit of all, fairness, equity, diversity and inclusiveness guide our work. We value transparency, reproducibility, and critique, accountability, responsibility, and collaboration. The Future of Science is Open, as is our Science.

 

About me

I actively contribute to the International Stroke Genetics Consortium. In addition, I made some contributions to international consortia, including GENIUS-CHDGIANTGLGCGoDMC, and various other international consortia.

Together with Menno de Winther and Jeffrey Kroon, I re-activated the Dutch Atherosclerosis Society and I am one of the driving forces in the current DAS board.

I hold a degree in Biology (BSc) and Medical Biology (MSc) from the Utrecht University, Utrecht, the Netherlands. I obtained my PhD in 2016 entitled "The genetics of carotid atherosclerosis - Associations with clinical outcome and histological plaque characteristics" under supervision of professor Gerard Pasterkamp, professor Paul I.W. de Bakker, and doctor Jessica van Setten. The thesis is publicly available here and it is the first thesis accompanied by a soundtrack available on Spotify.

I and my team's work is covered through various (inter)national collaborative grant programs: EU H2020 TO_AITION (grant number: 848146), EU HORIZON NextGen (grant number: 101136962), EU HORIZON MIRACLE (grant number: 101115381), NIH-NKD (), and Health~Holland PPP Allowance ‘Getting the Perfect Image’.

We are thankful for the support of the Leducq Fondation ‘PlaqOmics’ and ‘AtheroGen’, and the Chan Zuckerberg Initiative ‘MetaPlaq’. The research for this contribution was made possible by the AI for Health working group of the EWUU alliance (https://aiforhealth.ewuu.nl/). The collaborative project ‘Getting the Perfect Image’ was co-financed through use of PPP Allowance awarded by Health~Holland, Top Sector Life Sciences & Health, to stimulate public-private partnerships.

I have received Roche funding for unrelated work. 

Research groups

Scientist examines DNA models in modern Genetic Research Laboratory.

Genetics of atherosclerosis

Research aim

Move from genome-wide association studies loci to novel therapeutic targets and biomarkers for cardiovascular diseases through integrative genomics, single-cell multiomics, and digital pathology of human atherosclerotic plaque, with a focus on patient heterogeneity and subgroup-aware risk prediction.

Go to group

Recent publications

Genetically determined ancestry associates with morphological and molecular carotid plaque features Nima Fahim, Tim R. Sakkers, Floor B.H. van der Zalm, Joost Hoekstra, Dominique P.V. de Kleijn, Michal Mokry, Jose Verdezoto Mosquera, Gerard Pasterkamp, Hester M. den Ruijter, Clint L. Miller, Jessica van Setten, Sander W. van der Laan
Atherosclerosis, 2026, vol. 415
Atherosclerotic Fibrous Plaques in Women Present ECM Remodeling Linked to TGF-β Tim R Sakkers, Eloi Mili, Hanna Winter, Daniek Kapteijn, R Noah Perry, Nicolas Barbera, Kelsey Watts, Inês R Dias, Denitsa Meteva, Marian Wesseling, Barend M Mol, Gert J de Borst, Dominique P V de Kleijn, Sander W van der Laan, Mete Civelek, Stephen J White, Lars Maegdefessel, Manuel Mayr, Gerard Pasterkamp, Michal Mokry, Ernest Diez Benavente, Hester M den Ruijter
Circulation research, 2026, vol. 138
Major depression and atherosclerotic disease Emma Pruin, Meike Bartels, Ernest Diez Benavente, Noortje A M van den Dungen, Joost K R Hoekstra, Dominique D P de Kleijn, Lennart P L Landsmeer, Michal Mokry, Gerard Pasterkamp, Brenda W J H Penninx, Wouter J Peyrot, Hester M den Ruijter, Sander W van der Laan, Yuri Milaneschi
European Neuropsychopharmacology, 2026, vol. 106
Essentials of transcriptomic methods Victoria Stopa, Miron Sopić, Guanliang Li, Judith Sluimer, José Basílio, Sander W. van der Laan, David P. Kreil, Yvan Devaux, Bernhard Hochreiter
2026, p.131-172
Technical and legal aspects of federated learning in bioinformatics Daniele Malpetti, Marco Scutari, Francesco Gualdi, Jessica van Setten, Sander van der Laan, Saskia Haitjema, Aaron Mark Lee, Isabelle Hering, Francesca Mangili
Frontiers in Digital Health, 2025, vol. 7
Disturbed flow induces reprogramming of endothelial cells to immune-like and foam cells under hypercholesterolaemia during atherogenesis Christian Park, Kyung In Baek, Ruei-Chun Hung, Leandro Choi, Kiyoung Jeong, Paul Kim, Andrew Keunho Jahng, Jung Hyun Kim, Yerin Kim, Mostafa Meselhe, Ashwin Kannan, Chien-Ling Chou, Dong Won Kang, Eun Ju Song, Jay Aaron Bowman-Kirigin, Michael David Clark, Sander W van der Laan, Gerard Pasterkamp, Nicolas Villa-Roel, Alyssa Panitch, Hanjoong Jo
Cardiovascular research, 2025, vol. 121, p.2679-2699

Fellowships & Awards

I applied and received the following grants.

2024-09 to 2027-09: NIDDK-NIH Genetics of atherosclerosis and diabetes 1 | $ 962,975.- | Collaborative Grant together with M. Civelek, S. Ӧnengüt-Gümüşcü, and C.L. Miller.

2024-01 to 2028-01: EU Horizon NextGen | € 2,300,000.- | Collaborative Grant together with S. Haitjema, J. van Setten, P. van der Harst among others.

2024-09 to 2028-09: EU Horizon MIRACLE | € 650,000.- | Collaborative Grant together with G. Pasterkamp, M. Mokry, M. Kaikkonen, C. Onlan-Moret among others.

2024-09 to 2025-09: Leducq AtheroGen award Sex differences in stroke genetics | $ 37,500.- | Collaborative Grant together with C.L. Miller.

2023-07 to 2026-08: HealthHolland Getting the Perfect Image | € 839,464.- | Collaborative Grant together with C. Glastonbury and C.L. Miller.

2023-06 to 2024-06: EWUU award PlaqAI | € 35,000.- | Collaborative Grant together with M. Veta & A. López-Rincón.

2023-07 to 2025-07: Leducq PlaqOmics award SPOCq | € 109,000.- | Collaborative Grant together with C.L. Miller.

2022-07 to 2024-07: CZI MetaPlaq | $ 200,000.- | Collaborative Grant together with C.L. Miller.

2020-1 to 2021-01: Leducq PlaqOmics award PlaqView | $ 50,000.- | Collaborative Grant together with C.L. Miller.

2019-09 to 2020-09SIG “DEEP-ENIGMA” | € 5,000.- | Collaborative Grant together with D. Hessen, and A. Bagheri.

2019-09 to 2020-09SIG “ELSIE” | in kind | Collaborative Grant together with Aletta D. Kraneveld, D. Oberski, and A. López-Rincón.

2019-05 to 2020-05SIG “CONVOCALS” | € 5,000.- | Collaborative Grant together with A. Bagheri, and T. van de Kerkhof.

2020-01 to 2025-01: H2020 (EU) "TO_AITION" | € 473,750.- | Collaborative Grant together with G. Pasterkamp, M. Mokry, and I. Höfer.

2017-09 to 2019-09: ERA-CVD JCT 2017 (EU; JTC2017-40-2017T096) “druggable-MI-genes” | € 250,000.- | Collaborative Grant together with Folkert W. Asselbergs.

2015-06 to 2015-06: Jaap Schouten Foundation (Rotterdam, Rotterdam, Netherlands) “Travel Grant” | € 1,500.- | European Society of Human Genetics Conference 2015.

2013-2014: BBMRI-NL (Leiden, Netherlands) “Genotyping of the Abdominal Aortic Aneurysm-Express Biobank Study” | € 50,000.- | Grant number: CP2013-63.

External positions

Team member - Data broker; analyses; onderhandelen - AtheroScreen

Board member - Bestuur; website ontwikkelen; programma samenstellen; administratie bijhouden. Zie toelichting. - Dutch Atherosclerosis Society

Webmaster - Onderhoud en ontwikkelen websites; bijhouden van administratie. - Stichting Geneeskundig Genootschap Den Haag e.o.